Molecular modeling often involves computationally demanding tasks such as protein structure prediction or molecular dynamics simulations. Managing these cloud-based computations efficiently can be a challenge for researchers juggling multiple projects. If you’ve ever found yourself searching for a centralized way to launch, monitor, and retrieve computational results, SAMSON’s Job Manager is here to simplify the process.
What Does the Job Manager Do?
The Job Manager in SAMSON enables you to manage cloud-based computations with ease. Whether you’re running protein structure predictions using AlphaFold and NVIDIA BioNeMo services or conducting molecular dynamics simulations with GROMACS, Job Manager serves as a central hub for:
- Launching new jobs through compatible SAMSON extensions.
- Executing cloud computations and controlling their status (start, pause, stop).
- Retrieving computational results and syncing them directly with SAMSON.
Accessing the Job Manager is simple. Just navigate to Interface > Job manager in SAMSON.
Key Features That Simplify Your Workflow
The Job Manager is designed not only to streamline workflows but also to make them user-friendly. Here are some features molecular modelers will appreciate:
1. Job Details View
By clicking on any job, you can view its details on the right-hand side of the Job Manager. This allows you to stay informed about your computational tasks at all times.

2. Rename Jobs and Add Notes
You can personalize your jobs by editing their names and adding notes directly in the interface. Any changes you make are automatically synchronized with your SAMSON Connect account.

3. Easy File Download
To download job files, simply double-click on the job in the Job Manager. All related files will be retrieved from the cloud in one go.

4. Contextual Right-Click Menu
The Job Manager offers a context menu that provides quick access to local files, cloud-stored remote files, and the corresponding job view on SAMSON Connect. This is particularly useful for collaboration and sharing tasks.

Boost Collaboration and Transparency
If you frequently collaborate with colleagues or need project transparency, the Job Manager integrates seamlessly with SAMSON Connect. Share jobs or control visibility settings, ensuring essential data is accessible without compromising security. For further details on collaboration and sharing, see the resource on Collaboration – Viewing and sharing jobs on SAMSON Connect.
Get Started
The Job Manager accelerates molecular modeling projects, offering consolidated tools to handle cloud workflows effortlessly. To explore more about launching and monitoring cloud-based computations, visit the official documentation page: SAMSON Cloud Computation Documentation.
Note: SAMSON and all SAMSON Extensions are free for non-commercial use. You can download SAMSON for free at https://www.samson-connect.net.
