When preparing molecular presentations, researchers often focus heavily on the scientific content—molecular structures, simulation results, docking poses—and understandably so. However, the presentation layer of that information is also crucial. Transitions that appear abrupt or distracting can reduce clarity or even break the audience’s attention, especially during pitch-like setups or educational demos. This is where background transitions matter, even for science.
In SAMSON, the Set background animation gives you control over your scene’s visual rhythm, helping to create a smoother, more polished viewing experience for molecular presentations. Whether it’s adding relevant illustrations, branding, or calming colors between chapters in your animation timeline—for instance, showing structural changes in proteins—this feature can help you avoid abrupt changes that disconnect the narrative.
Set the Mood: Interpolated Backgrounds
The Set background animation allows you to switch backgrounds between two keyframes while SAMSON smoothly interpolates between them. This means gradual changes from one background color or image to another, rather than jumping instantly from slide to slide.
You can even use images as backgrounds, such as title slides or diagrammatic aids. When an image is added, you choose whether it is fully contained in the scene or covers it entirely—perfect for ensuring that your visual support material looks the way you expect during a presentation.

Customizing Your Presentation Flow
To use this animation in SAMSON’s Animator:
- Double-click the Set background animation from the Animation panel.
- This places the first keyframe on the current frame. Add a second keyframe where the transition should end.
- Apply another Set background later, and SAMSON will generate interpolations between the two automatically.
Tip: You can reposition the animation keyframes anytime to fine-tune the pacing and transitions.
Refining with Easing Curves
What if you want your background to fade in quickly and then settle more slowly? Or vice versa? SAMSON provides easing curves that let you define how the interpolation behaves over time. You’ll find these options in the Inspector.

This way, you can build narrative tension or set a calming tone visually, without having to externally edit video or rely on post-production software.
Use Cases in Molecular Design
Here are some practical ways molecular modelers use background setting in their work:
- Chapter separation: Visually divide multiple steps in a complex molecular mechanism.
- Themed backgrounds: Use specific images or colors to indicate different mutation scenarios or simulation types.
- Presentation enhancement: Add institutional branding or captions in background images.
For researchers, this can lead to clearer visual narratives, and for educators, it supports cleaner learning arcs across animations.
To learn more or explore additional options, visit the full documentation page on Set background animation.
SAMSON and all SAMSON Extensions are free for non-commercial use. You can download SAMSON at https://www.samson-connect.net.
