Creating clear, engaging visual presentations of molecular systems is a daily challenge for many researchers, educators, and communicators in molecular science. Whether presenting results at a conference or preparing animations for student lectures, one of the recurring pain points is guiding the viewer’s attention without overwhelming them with overly complex visual transitions or cluttered sequences.
This is where the Set background animation in SAMSON can help. It allows users to visually segment presentations by smoothly transitioning between background visuals. This not only enhances storytelling but also provides a non-intrusive way to introduce context, such as highlighting different stages of a simulation or bringing up a title slide during a transition.
Use Case: Seamless Visual Breakpoints
Imagine you’re walking your audience through a molecular folding process. It’s useful to introduce a short context—a slide with a title or a comparison figure—before jumping into the next fold. Rather than cutting the animation with a disruptive white background or hard jump, the Set background animation blends one scene into the next.
The animation consists of two keyframes:
- Keyframe 1: Specifies the background (a color or an image file).
- Keyframe 2: Defines when interpolation stops (unless another Set background animation starts afterwards).
If multiple Set background animations are used throughout the timeline, SAMSON interpolates them smoothly—providing a dynamic yet subtle shift that keeps the viewer focused.
How to Add the Background Animation
Adding this animation is straightforward:
- Open the Animation panel in the Animator.
- Double-click on Set background to insert it at the current frame.
- Move the keyframes as desired using the timeline to control when and how the background changes.
To fine-tune the transition, adjust the Easing curve to control interpolations between backgrounds. This lets you personalize the feel of your transitions—for example, starting sharp and slowing down or maintaining a constant smooth pace.
Images as Backgrounds
You can also use image files (e.g., PNG or JPEG) as backgrounds. This is ideal when overlaying molecular animations with schematic slides, paper figures, or introductory graphics. Just note that images can be set to either:
- Contain: The image fits within the background frame without cropping.
- Cover: The image fills the screen and may be cropped along the longer axis.
This flexibility allows for consistent formatting when switching between molecular animations and supplementary visuals during a single presentation.

Final Thoughts
The Set background animation is a small feature with a big impact—it helps bring narrative clarity and visual rhythm into your scientific presentations. For educators, it offers a natural flow between concepts. For researchers, it enhances how discoveries are communicated without technical overhead.
Learn more about the Set background animation on the official documentation page.
SAMSON and all SAMSON Extensions are free for non-commercial use. You can get SAMSON today at https://www.samson-connect.net.
