Communicating complex molecular processes or simulation results often involves building animated presentations. But often, the focus is exclusively on molecular geometry and motion, leaving the background of your presentation static or blank. This can limit clarity when walking an audience through different steps—or simply make your presentation feel disconnected and harder to follow visually.
If you use SAMSON for creating animations, there’s a surprisingly simple way to enhance your visual storytelling: use background transitions. The built-in Set background animation effect lets you control what appears behind your molecule—including static colors or full images like diagrams, slide-style text, or ecosystem maps.
Why Backgrounds Matter in Molecular Design
Visual cues are critical in complex scientific presentations. A thoughtful background can:
- Segment your animation into logical phases using different colors or textures.
- Introduce visual context without cluttering the molecular data.
- Include supporting materials such as charts or images behind the 3D scene.
Think of it like layering: foreground for detailed molecular data and background for structure, emphasis, or atmosphere.
How Background Animation Works in SAMSON
The Set background animation in SAMSON plays between two keyframes and allows you to:
- Change background color, gradient, or image between keyframes.
- Choose whether an image covers or is contained within the viewport.
- Interpolate automatically between backgrounds for a smooth fade effect.
Step-by-Step: Adding a Background Animation
1. In the Animation panel, double-click on Set background to insert the effect.
2. A begin keyframe will be placed at your current frame.
3. Adjust the keyframe placement using the timeline.
4. Add a background (color or image), then configure how the image fits the screen.
5. If you add another Set background effect later in your timeline, SAMSON will interpolate between them automatically.
The Inspector panel lets you control even more nuanced behavior with easing curves, determining how the transition between background states feels—linear, ease-in, ease-out, or custom curves.

Using Backgrounds to Deliver Clearer Visual Narratives
Importantly, you can include image-based backgrounds such as slide templates, labels, or timelines. This means your molecular animation can also serve as a structured presentation. For example, show a slide explaining the aim of a simulation while the model fades in, or end a simulation with a background summarizing results and future work.
With background interpolation, you don’t need to do manual editing to create smooth transitions: SAMSON handles it for you, keeping your focus on science, not video production.
Try It Yourself
If you’re building presentations in SAMSON, consider integrating background transitions, especially when moving between conceptual stages or results. It’s an easy way to make a big difference in understanding and engagement.
To explore more details on working with background animations, visit the original documentation.
SAMSON and all SAMSON Extensions are free for non-commercial use. You can get SAMSON at https://www.samson-connect.net.
