Author: OneAngstrom

Molecular modeling often requires specialized tools, depending on the type of analysis or simulations you need to perform. Switching between multiple standalone software solutions can be both time-consuming and cumbersome. Fortunately, the modular approach of SAMSON Extensions offers a solution…

For molecular modelers, identifying stable and fleeting interactions within molecular trajectories is often key to understanding biological mechanisms or refining molecular designs. But how can one systematically uncover which interactions are persistent and which are just transitory? Enter the Contact…

When working on molecular models, navigating different views swiftly can contribute greatly to your productivity. Imagine seamlessly switching between a close-up of an active site and a full view of a large biomolecule, all within the same session. This is…

For molecular modelers dealing with intricate trajectories, structures, or conformational changes, reviewing molecular animations smoothly can be challenging. The Play Path animation in SAMSON is an efficient feature that simplifies the visualization of molecular paths, cycles, and transitions within a…

For molecular modelers and researchers in molecular design, understanding the mechanism behind SARS-CoV-2 spike protein motion is crucial. This motion plays a key role in the ability of the virus to infect human cells by binding to the ACE2 receptor.…

Molecular modelers working with crystal structures often need to simulate imperfections within those structures to better understand their real-world behavior. For instance, defects in a diamond crystal can significantly influence its physical properties. The Crystal Creator Extension in SAMSON provides…

Molecular modelers often face the challenge of analyzing large datasets quickly and effectively to uncover meaningful relationships between properties. Identifying correlations, anticorrelations, or clusters can lead to groundbreaking insights, but the process isn’t always straightforward. If you’ve struggled with making…

Visualizing molecular structures effectively often requires thoughtful customization, and color can play a major role in how insights are derived. For molecular modelers using SAMSON, one of the most efficient ways to enhance the interpretability of your molecular models is…

Molecular modelers often face an important challenge: how to run computationally heavy GROMACS simulations without being limited by local hardware. SAMSON’s GROMACS Wizard offers a practical solution by enabling users to perform these simulations in the Cloud, freeing their local…