Molecular modeling often involves juggling diverse files—ranging from Python scripts and data files to research papers and images. Integrating these files seamlessly into modeling workflows can be a challenge, but SAMSON’s Universal File Embedding makes it easy to store and manage all related files within your molecular documents. Let’s explore how this feature eliminates clutter and simplifies collaboration.
What is Universal File Embedding?
In SAMSON, documents can contain not only molecular models but also any number of embedded files and folders. For example, you can include Python scripts for machine learning applications, create self-contained presentations with research images, or embed supplementary datasets directly within your molecular documents. These embedded items are stored in the document itself, making it portable and self-contained.
How to Embed Files in SAMSON:
Embedding a file or folder within your molecular document in SAMSON is straightforward. You can drag and drop files directly into the interface. Alternatively, you can navigate to:
- Home > Embed files to add specific files.
- Home > Embed folders to embed entire directories.
You will be prompted to confirm whether you wish to embed these files. Once embedded, they become part of the document, allowing you to transfer or share the document without needing to worry about separately managing these files.
Key Benefits of File Embedding:
- Self-contained workflow: All related files stay together, simplifying transfer between devices or collaborators.
- Collaboration-ready: Sharing a document means sharing the entire context—including scripts, data, and supplementary files.
- Organized modeling environment: No need to search for or manage external references or supporting files—it’s all in one place.
Why This Matters for Molecular Modelers:
Molecular modeling often requires referencing data from disparate sources or running simulations with supplementary scripts. Embedding these directly into the molecular modeling platform ensures smooth workflows, facilitates collaboration, and minimizes the risk of losing valuable information.
Moreover, embedded files stay with the document, enabling you to work seamlessly on different machines without re-linking assets or re-downloading external files.
Learn More:
If you’d like to deepen your understanding of SAMSON’s file embedding features, you can refer to the comprehensive guide at SAMSON’s documentation on loading molecules.
Note: SAMSON and all SAMSON Extensions are free for non-commercial use. You can get SAMSON at SAMSON Connect.