Molecular modeling often involves computationally heavy tasks like protein structure predictions or simulations that require extended computational resources. Managing and organizing these computations efficiently can be challenging. Enter SAMSON’s Job Manager, a tool designed to streamline cloud computations, making them easier to launch, monitor, and retrieve results.
What Does the Job Manager Do?
The Job Manager is your centralized hub for managing all cloud-based simulations and computations initiated from the SAMSON platform. Whether you’re running a protein structure prediction pipeline using AlphaFold or performing molecular dynamics simulations through GROMACS, the Job Manager ensures you have complete control. It provides functionality to:
- Launch new jobs directly from extensions within SAMSON.
- Execute jobs in the cloud, including starting, pausing, and stopping tasks as needed.
- Monitor the progress of your computations in real time.
- Retrieve results seamlessly into the platform for analysis.
With these capabilities, you can optimize your workflows, saving both time and effort while keeping your projects organized.
How to Access the Job Manager
Using the Job Manager is straightforward. Simply navigate to Interface > Job Manager within SAMSON, and you’ll have access to a range of tools to oversee your jobs.

Exploring Key Features
1. Viewing Job Details
Want to dive deeper into specific tasks? Click on any job in the Job Manager, and its details will appear on the right-hand panel. This allows you to keep track of progress and ensure calculations are on track.

2. Editing Job Metadata
You can also edit job names and notes directly in the Job Manager. This is particularly useful for keeping detailed records of your projects, and updates are automatically synced with your SAMSON Connect account for easy cloud management.

3. Downloading Results
Once jobs are complete, retrieving results is simple. Just double-click a job in the Job Manager, and all associated files are downloaded automatically. Say goodbye to hunting for missing files!

4. Context Menu for Rapid Access
The Context menu offers quick access to your local files, cloud-stored files, and job views on SAMSON Connect. It’s an intuitive way to manage data seamlessly across multiple locations.

Designed for Collaboration
Collaboration is often key in molecular modeling projects. The jobs you run in the cloud are accessible via SAMSON Connect, where you can manage access permissions and easily share results with colleagues.
More information on collaboration features is available here.
Ready to Optimize Your Workflow?
If you’re looking to simplify and empower your molecular modeling, the Job Manager is an essential tool that removes complexities and allows you to focus on discovery. The comprehensive features ensure your cloud workflows are as efficient as possible.
To learn more, visit the SAMSON Cloud Computations documentation page.
Note: SAMSON and all SAMSON Extensions are free for non-commercial use. Download SAMSON for free at samson-connect.net.
