Molecular modelers often grapple with managing computational jobs effectively, especially when utilizing cloud-based tools for complex tasks like protein structure prediction with AlphaFold or molecular dynamics simulations using GROMACS. What happens after you initiate these computations? How do you keep track of them, access results, or share them with collaborators? Understanding the Job Manager in SAMSON could make your workflow more streamlined and manageable.
What Is the Job Manager?
The Job Manager in SAMSON is a centralized interface designed to help you manage, monitor, and retrieve your cloud computations. Once you’ve launched a job in the SAMSON cloud, you can use the Job Manager to perform a variety of tasks, all within a user-friendly system.

How Does It Help You?
The Job Manager is more than just a dashboard. Its features save valuable time and improve project collaboration. Here’s what you can do with it:
- Create Jobs: Initiate computational tasks and workflows directly from SAMSON extensions that allow for cloud computations.
- Manage Executions: Start, pause, or stop jobs at your convenience. Real-time monitoring ensures you know the status of every computation.
- Retrieve Results: Once a cloud job finishes, you can easily bring back the results into SAMSON for analysis or further processing.
- View Job Details: Selecting a job displays detailed information about it on the right panel of the Job Manager.
Customization and Easy File Access
With SAMSON’s Job Manager, you can ensure efficient documentation of your projects. Jobs can be renamed and annotated with notes, all of which automatically sync with your SAMSON Connect account. Additionally, downloading job files is as simple as double-clicking a job. A convenient Context menu lets you rapidly access local files (that have already been downloaded), remote files (stored in the cloud), or even view the job directly on SAMSON Connect.

You can find all relevant details by hovering over or accessing jobs through their context menus. For instance, rapid access to both local and remote files adds to the streamlined workflow experience.

Sharing and Collaboration
Collaboration is often at the heart of molecular modeling activities. The jobs you create and run in the cloud are accessible from SAMSON Connect. You can control the accessibility of your shared jobs, ensuring seamless teamwork and transparent project updates with colleagues and collaborators.
Learn More
The Job Manager is an integral part of the SAMSON cloud ecosystem, enabling scientists to focus on their research instead of logistics. If you’d like to explore its potential in more detail, head over to the official documentation page: SAMSON Cloud Documentation.
Note: SAMSON and all SAMSON Extensions are free for non-commercial use. You can download SAMSON at https://www.samson-connect.net.
