Animating molecular models can be an essential tool for researchers aiming to visualize structural transitions, explain complex interactions, or create compelling presentations. Among various animation techniques available in the SAMSON molecular design platform, the ‘Show’ animation stands out for its simplicity and practicality. In this blog post, we will discuss how to use the ‘Show’ animation effectively and how it can streamline molecular modeling workflows.
What is the ‘Show’ Animation?
The Show animation is a feature in SAMSON that makes specified nodes (representing molecular components or structures) appear at a selected keyframe and stay visible until the end of the animation sequence. It operates by toggling the visibility of nodes, ensuring clarity in representations without relying on transparency effects. By combining two consecutive animations, Hidden and Shown, into one, the ‘Show’ animation simplifies the animation process.
Adding the Animation
Here’s how you can implement the ‘Show’ animation in SAMSON:
- Select the nodes you want to make visible.
- In the Animation panel of the Animator, double-click the Show animation effect.
- Adjust the animation’s 3 keyframes:
- Between keyframes 1 and 2, the nodes will remain hidden.
- At keyframe 2, the nodes will appear.
- Between keyframes 2 and 3, the nodes will stay visible.
You can fine-tune the positioning of these keyframes according to your desired timeline, enabling greater control over the animation’s effect. This adaptability makes the ‘Show’ animation particularly useful for presentations, tutorials, and data visualization tasks.
Enhancing Animation with Easing Curves
The seamlessness of transitions between keyframes can make or break an animation. With SAMSON, you can enhance your animation by adjusting the Easing curve, which defines how parameters are interpolated between frames (e.g., smooth, linear, or sudden changes). Whether you aim for a natural fade-in effect or a sharp appearance, the Easing curve provides the flexibility you need.
Best Practices
- Use the ‘Show’ animation to emphasize key molecular components or interactions in presentations.
- Combine it with other animations (e.g., Hide, Flash) to create dynamic and engaging narratives.
- Ensure sufficient contrast between nodes and the background for a clearer presentation.
Animating molecular models doesn’t need to be complicated. The ‘Show’ animation is both simple and powerful, providing a straightforward solution to illustrate the appearance of molecular structures during interactive timelines.
To dive deeper into how the ‘Show’ animation works and explore other animation tools in SAMSON, visit the official documentation page: Learn more here.

Note: SAMSON and all SAMSON Extensions are free for non-commercial use. Download SAMSON at www.samson-connect.net.
