For molecular modelers, efficiency and precision in designing molecular structures are critical. One underrated yet immensely influential feature within the SAMSON molecular design platform is the concept of activating editors. Knowing how editors work and how to activate them can…

Animations can be an invaluable tool in molecular modeling, helping researchers and educators visualize complex molecular phenomena, prepare compelling presentations, or record movies for better communication. But with a wide range of animation effects available, it can be daunting to…

Molecular modeling often involves tasks such as transforming structures or selecting specific regions for further manipulation. These tasks can become tedious if the available tools are not intuitive or accessible. For users of the SAMSON molecular design platform, the concept…

Molecular modeling experts often struggle with achieving realistic geometry adjustments in real-time, especially when working on complex systems. Wouldn’t it be rewarding to seamlessly manipulate your molecular structures while observing immediate feedback from physics-based simulations? With SAMSON, this is not…

When working on molecular modeling, the ability to carefully analyze changes across conformations or trajectories can be essential. However, these analyses often require reverse visualizations to effectively study transitions, track dynamics, or identify trends in molecular behavior. If you’ve been…

One of the common challenges in molecular modeling is correctly parametrizing ligands for accurate molecular dynamics (MD) simulations. If your ligand is not already part of the standard residues in a force field, preparing it can be a crucial yet…

For molecular modelers, setting up and executing a center-of-mass (COM) pulling simulation can be a challenging task. Whether you’re analyzing protein-protein interactions or studying processes like ligand unbinding, ensuring your system is accurately configured is essential for meaningful results. However,…