Molecular modelers often seek efficient ways to analyze and visualize complex molecular systems. Whether you are exploring protein-ligand interactions, structural dynamics, or large biomolecular assemblies, creating clear, informative, and aesthetic visualizations can sometimes feel challenging. This is where the power…

Have you ever needed to install an older version of software but struggled to navigate the process? If you’re working in molecular modeling with SAMSON and find yourself needing a specific previous release, here’s a step-by-step guide to make it…

Coarse-grained (CG) molecular modeling is a popular approach in molecular design for studying complex systems while reducing computational costs. However, efficiently preparing a coarse-grained system can feel daunting, even for experienced molecular modelers. The GROMACS Wizard in the SAMSON platform…

If you’re a molecular modeler, you’ve likely faced the frustration of needing highly specific tools and workflows precisely tailored to your needs. What if you could extend the power of an already versatile molecular design platform, like SAMSON, with features…

For molecular modelers, one common challenge is efficiently building, editing, and simulating molecular structures that may undergo significant topological changes. SAMSON’s Interactive Modeling Universal Force Field (IM-UFF) offers a solution tailored to this need, seamlessly blending interactive molecular modeling with…

Molecular modeling can become increasingly complex as the scope of your research grows. SAMSON, the integrative molecular design platform, provides a powerful interface to tackle these challenges more efficiently. However, getting around the extensive features of the SAMSON interface for…

If you regularly create molecular presentations, you know how crucial it is to control the pacing. Some frames require extra attention for discussion or analysis, and that’s where the Pause animation in SAMSON can be invaluable. Let’s explore how this…

For molecular modelers, managing complex molecular structures with multiple residues and chains can often feel overwhelming. Keeping track of sequences and their corresponding properties across different views commonly leads to frustration when trying to align selections or visualize modifications. This…

For molecular modelers, minimizing structures to achieve optimized geometries is a routine task. However, selectively minimizing only specific parts of a molecular system can sometimes be challenging, especially when working with large or complex structures. Thankfully, SAMSON provides features tailored…