Exploring Defects in Diamond Structures with SAMSON.

For molecular modelers working on materials science, understanding how crystal defects influence a material’s properties can be a crucial, yet challenging task. Diamonds, for instance, are not perfect. Defects in their structures, such as unoccupied atom sites, significantly alter both…

Mastering Chain Attributes in SAMSON’s Node Specification Language

Molecular modelers often face challenges when working with complex systems, especially when navigating and specifying chains within their structures. SAMSON’s Node Specification Language (NSL) offers a powerful toolset for detailing and filtering chain-level attributes effectively. In this blog post, we’ll…

Streamlining Molecular Visualization with Visual Presets in SAMSON

Molecular modeling can often involve managing complex systems with various components that require distinct visualization styles. Switching back and forth between different representations can feel like a daunting task, especially when working with large molecular systems or preparing visualizations for…

Effortlessly Running GROMACS in the Cloud with SAMSON

For molecular modelers, running computationally intensive simulations on local machines can be a challenge, especially when working with large systems or complex molecular dynamics steps. Fortunately, SAMSON’s GROMACS Wizard delivers a convenient solution for executing these tasks in the Cloud,…

Simplify Molecular Modeling with Chain Attributes in SAMSON

How Chain Attributes Streamline Molecular Modeling in SAMSON Molecular modelers often face challenges in selecting and analyzing specific regions of molecular structures, especially when they work with large complexes. Filtering chains based on precise criteria such as the number of…

Aligning Protein Sequences: A Workflow for Molecular Modelers

For molecular modelers, understanding the nuances of protein functions often hinges on comparing sequences and structures. Whether you’re investigating conserved residues or studying conformational changes, protein alignment is a crucial step. SAMSON’s Protein Aligner offers an intuitive and efficient workflow…