Sometimes the latest software update isn’t the best solution for everyone. Whether you’re continuing a project that depends on a previous version or need compatibility with specific SAMSON Extensions, installing an older version of SAMSON can be necessary and even…

When preparing molecular animations, one common challenge is drawing attention to specific parts of a model without overwhelming the viewer with too much motion or information. Whether you’re highlighting a binding event, a structural change, or just toggling visibility for…

Whether you’re preparing a molecular presentation, creating a scientific animation, or designing an educational video, selectively hiding parts of your molecular model can be essential. Highlighting only the key actors of a protein-ligand interaction, demonstrating intermediate stages of a conformational…

If you’ve ever had to run a Molecular Dynamics (MD) simulation for more than one conformation of a molecule, you’ve probably felt the pain of repetition: preparing each system individually, applying the same settings again and again, and tracking multiple…

One of the recurring challenges in molecular modeling is checking whether a protein structure is physically plausible before running simulations or using it in predictive workflows. A common issue: residues with unfavorable backbone conformations can skew simulations, especially in homology…

When creating molecular animations, clarity is everything. Whether you’re preparing a presentation, designing teaching materials, or just trying to isolate a part of your model, hiding atomic structures at the right frame can make a big difference in storytelling and…

Whether you’re studying molecular dynamics, designing new molecules, or just trying to get your bearings in a powerful modeling environment, the learning curve of a molecular modeling platform can sometimes feel steep. That’s why SAMSON includes a helpful feature that…

Molecular modelers often face the challenge of understanding how proteins or macromolecular complexes open up to allow small molecules to bind. Deciphering this process is key in fields like drug discovery and biomolecular engineering—but simulating these motions can be time-consuming…

If you prepare molecular presentations or videos, you’ve probably faced the challenge of showing complex movements clearly. Key questions often arise: How do I highlight a particular molecule entering a system? Can I create paths for camera motion? How do…

For molecular modelers performing Umbrella Sampling, one of the early and often time-consuming hurdles is selecting the right set of initial conformations. This step significantly influences simulation efficiency and accuracy. If you’ve ever found yourself wondering how best to extract…