Author: OneAngstrom

Molecular modeling often involves multiple, intricate editing steps, from tweaking a structure to building and refining molecules. But what if you make a mistake, or wish to revisit an earlier state in your project? SAMSON’s History View offers a powerful…

For molecular modelers, conveying intricate details of molecular systems effectively often requires clarity and focus. Imagine trying to highlight a critical binding site or interaction within a massive molecular system. How do you zoom in elegantly and maintain the visual…

Umbrella Sampling is a powerful molecular dynamics technique to study the free energy landscape of complex systems. However, setting up the initial configurations for such simulations can be daunting. In this blog post, we’ll explore how the GROMACS Wizard in…

For molecular modelers, navigating complex macromolecular structures and working with multiple chains can be daunting. Have you ever spent too much time trying to focus on a specific sequence or accurately link your selections across views? SAMSON addresses this challenge…

One of the key challenges for molecular modelers is analyzing energy data efficiently to make sense of their simulations. Whether comparing potential and kinetic energies, or tracking energy along a molecular path or trajectory, accurate energy analysis can provide valuable…

In molecular modeling, the ability to explore complex protein motions is critical for understanding biological processes. One such challenge is analyzing the motion of the SARS-CoV-2 spike protein, which is central to how the virus binds and gains entry into…