Molecular modelers are often faced with complex setups before running simulations. Preparing a system to utilize a sophisticated interaction model such as the Universal Force Field (UFF) can seem intimidating. But with SAMSON, this process has been streamlined into a…

Have you ever faced the challenge of needing to move your molecular view horizontally in a smooth and controlled way, keeping both the camera’s position and focus synchronized? Whether you’re creating scientific presentations, analyzing molecular structures, or recording animations, aligning…

For many molecular modelers working in a network-restricted environment, installing software like SAMSON can become a complex task due to proxy settings. Understanding how to configure a proxy during installation ensures a smooth process and saves time. Let’s explore how…

Creating smooth, visually engaging animations of molecular trajectories can be a crucial task for molecular modelers aiming to analyze or communicate their results. Yet, reversing a specific path or trajectory while maintaining synchronization across multiple paths can pose challenges. Thankfully,…

For molecular modelers, sharing results and workflows seamlessly can be a challenge. Collaborating with colleagues, ensuring reproducibility, or packaging research outputs often requires tedious exchanges of files and instructions. What if there was a way to share not only your…

For molecular modelers, the preparation of a protein-ligand system for molecular dynamics simulations can be a challenging task. Especially when dealing with non-standard ligands, ensuring correct parametrization and compatibility with the chosen force field is critical but often tricky. This…

As a molecular modeler, one of the recurring challenges is efficiently analyzing reaction coordinates or studying ligand pathways. This often requires exporting atom trajectories from specific paths in your molecular models. Good news! SAMSON’s Export Along Paths extension offers an…

For molecular modelers, visualization is as critical as the creation of accurate models. Whether you’re interpreting complex structures or communicating your findings, the way you colorize your data can make a huge difference. SAMSON, the integrative molecular design platform, provides…