For molecular modelers, computing the Potential of Mean Force (PMF) is a critical step in understanding molecular interactions along reaction coordinates. However, managing simulations, ensuring proper input organization, and visualizing results can be daunting. The GROMACS Wizard in SAMSON simplifies…

For molecular modelers pushing the boundaries of their research, flexibility and customization in their tools are vital. SAMSON, the integrative molecular design platform, offers a unique way to extend its functionality with custom modules called SAMSON Extensions. But what if…

For molecular modelers striving to unravel the intricacies of molecular transitions, finding the most efficient and physically accurate pathways can be a significant hurdle. Identifying minimum energy paths and saddle points between two conformations requires robust and reliable tools. This…

For molecular modelers, the challenge of effectively visualizing complex molecular systems is all too familiar. Whether you’re working with protein-ligand interactions or full macromolecular assemblies, the time spent setting up visual representations and color schemes can hinder productivity. This is…

For molecular modelers, adjusting atomic properties and exploring customized configurations is often a time-consuming challenge. What if you could streamline these tasks with a simple scripting tool designed for precision and flexibility? Meet the Simple Script Extension in SAMSON, a…

For molecular modelers, visualizing atomic trajectories during dynamic presentations can be a game-changer. Whether you’re simulating assemblies, docking molecules, or moving atoms based on experimental constraints, you might often find yourself needing an efficient way to track and showcase these…

For molecular modelers, understanding the structural organization of proteins is often at the heart of their work. Whether you are visualizing biological assemblies, designing symmetric protein structures, or simulating molecular interactions, recreating symmetry mates is an essential step. But how…

Designing and visualizing molecules can be a complex task, especially when switching between different dimensions. Ever wished you could seamlessly create and edit your molecules in a unified, interactive environment? That’s where SAMSON’s Interaction Designer comes into play! In this…