SAMSON Blog – Page 8

Mastering Path Recording in Molecular Animations

For molecular modelers striving to capture complex atomic trajectories in their animations, SAMSON provides an intuitive and powerful feature: the Record path animation. This tool helps users record atoms’ movements during molecular presentations, effectively visualizing intricate interactions in a clear…

Demystifying Side Chain Attributes in Molecular Modeling

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For molecular modelers, gaining a precise understanding of the components of a molecule is fundamental. One specific challenge often faced is defining and retrieving attributes of side chains—the part of a molecule attached to the central core. SAMSON’s Node Specification…

Efficiently Docking Ligand Libraries Using AutoDock Vina Extended

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Docking libraries of ligands is a cornerstone task for many molecular modelers, especially those aiming to identify promising drug candidates. However, setting up such studies with traditional methods can be time-consuming and prone to errors. The AutoDock Vina Extended SAMSON…

Bringing Molecular Visibility to Life with Flash Animation in SAMSON

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If you are a molecular modeler, you’ve likely encountered the need to highlight specific molecular nodes or sequences during your animation without overcomplicating the visualization. Whether for presentations, research insights, or interactive storytelling, an animation that controls when nodes appear…

Mastering Progressive Transparency with the Appear Animation in SAMSON

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One common challenge for molecular modelers and visualizers is effectively showcasing molecular structures in dynamic presentations or animations. Sometimes, a smooth introduction to a complex structure can help colleagues or collaborators better grasp the model. This is where SAMSON’s Appear…

Tips for Filtering Structural Models Using SAMSON Attributes

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When working on molecular modeling projects, quickly isolating and analyzing specific structural models can streamline workflows and enhance productivity. SAMSON, the integrative molecular design platform, makes this process intuitive through its robust set of structuralModel attributes. These attributes allow modelers…

Navigating Molecule Attributes in SAMSON’s Node Specification Language

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Understanding molecular attributes is key for molecular modelers who want to efficiently filter, categorize, and analyze molecular systems. SAMSON’s Node Specification Language (NSL) provides robust tools to define and leverage these attributes effectively. In this blog post, we’ll explore how…

Mastering Smooth Rotations with the Orbit Camera Tool in SAMSON

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Molecular modeling often revolves around effectively presenting and analyzing molecular structures. One common challenge is creating smooth, dynamic camera rotations to highlight specific features, especially during collaborative presentations or while capturing animations for research documentation. SAMSON’s Orbit camera animation tool…

Simplifying Molecular Presentations with the Undock Animation in SAMSON.

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One of the common challenges molecular modelers face is presenting molecular dynamics and interactions in intuitive and visually clear ways. If you’re working with SAMSON, the powerful molecular design platform, you might already know that animations can be crucial for…

Mastering the ‘Conceal Atoms’ Animation for Molecular Visualizations

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If you've ever worked on presenting molecular models, you know how critical controlling visibility can be to explain structures and processes effectively. The 'Conceal Atoms' animation feature in SAMSON offers a seamless way to make atoms and their bonds progressively…