Are you working on molecular modeling and looking for ways to analyze and distinguish global shape trends of structures or trajectories? A powerful yet often underutilized tool is the Shape parameter. This descriptor is a fantastic addition to your arsenal,…

For molecular modelers working with reaction-coordinate pathways, umbrella sampling is an essential technique for deriving Potential of Mean Force (PMF) profiles. However, a common challenge lies in spacing initial conformations effectively, especially when aiming for accurate analysis while managing your…

One of the common challenges in molecular modeling is effectively visualizing and presenting trajectory data, particularly when portraying changes across conformations or demonstrating motion dynamics. SAMSON offers a useful solution to this with its Play reverse path animation feature, enabling…

For molecular modelers and researchers navigating through intricate datasets or structures, one persistent challenge is efficiently managing node attributes. SAMSON’s Inspector tool is designed to address this exact pain, allowing users to easily view and modify properties of selected nodes,…

Anyone who works in molecular modeling knows that customizing software settings can be a challenging and time-consuming task, especially when navigating through numerous configuration categories. Whether you’re trying to optimize rendering, adjust the interface, or tailor specific tools, finding exactly…

Explore How Proteins Evolve Over Time Have you ever wondered how to efficiently track changes in the backbone-state of a protein as it evolves over time? As a molecular modeler, you might often need to analyze how much of a…

Preparing input files for molecular simulations can sometimes feel like a convoluted process, particularly when you need the atomic coordinates along a specific path for reaction coordinate studies or free energy calculations. With SAMSON’s Export Along Paths extension, you can…