Speed Up Molecular Modeling with Quick Groups in SAMSON

As molecular modelers, we often find ourselves working on complex systems where saving, toggling, and managing selections can be a real challenge. What if switching between various structural elements of your molecular designs could be done in just a couple…

Streamlining biomolecular predictions with AlphaFold-2 in SAMSON

For molecular modelers, predicting biomolecular structures accurately is a vital task but often requires time, resources, and specialized workflows. Thankfully, SAMSON offers a seamless solution through its Biomolecular Structure Prediction extension, integrating cutting-edge tools like AlphaFold-2. This blog post will…

Building Lipid Layers Around Proteins in Minutes

Generating lipid layers around proteins is a crucial step for molecular modelers working on membrane proteins. It can often be a time-consuming and complex task that involves multiple tools or hours of manual configuration. The Molecular Box Builder extension for…

Unlock Efficiency with Folder Attributes in SAMSON’s NSL

Molecular modeling often involves working with complex structures and large datasets. Finding specific folders or structures within these datasets can quickly become a daunting task without the right tools. Fortunately, SAMSON’s Node Specification Language (NSL) offers an elegant way to…

Tracking Molecular Surface Exposure with SASA Analysis.

Understanding the solvent-accessible surface area (SASA) of a molecule or molecular group is a key tool for many molecular modelers. Whether you are studying protein-ligand interactions, binding pocket properties, or structural changes in macromolecules, SASA analysis can offer valuable insights.…