Author: OneAngstrom

For molecular modelers, achieving clarity and precision in how molecular systems are displayed is critical. The ability to customize visualizations down to the finest detail can make complex structures more understandable and modeling tasks significantly more efficient. If you’ve ever…

When working on molecular models, achieving the best possible visualization is crucial for understanding structural relationships and intricate details. One feature in SAMSON that can significantly enhance depth perception is ambient occlusion. This technique simulates how light behaves in real-world…

One of the critical steps in molecular docking is ensuring that your ligands and receptors are properly configured to provide realistic and accurate results. A major aspect of ligand preparation is adjusting rotatable bonds—this can influence both docking efficiency and…

Molecular modelers frequently encounter challenges when working with dynamic structures. The ability to accurately manipulate molecular systems, including breaking and forming covalent bonds during interactive modeling, is a crucial aspect that many tools lack. SAMSON’s Interactive Modeling Universal Force Field…

Molecular modeling often involves exploring intricate molecular systems, where precise camera control is crucial for clear visualization and communication of results. Have you ever needed to consistently move the camera horizontally to focus on different regions of your molecular model,…

When preparing molecular systems for simulation, one of the most common issues molecular modelers face is dealing with water molecules present in crystal structures. While some water molecules are crucial for simulating the biological relevance of a system, many others—especially…