Author: OneAngstrom

Making Molecular Annotations Clearer with SAMSON Labels

In the world of molecular modeling, clarity is often the key to effective communication. Whether you’re presenting a structural feature at a conference, sharing insights with collaborators, or preparing figures for publication, ensuring that annotations and measurements remain clear and…

Making Molecular Editing Interactive with IM-UFF.

Molecular modelers often encounter a significant challenge: effectively handling topological changes, such as bond formation and breaking, while editing molecular systems. These processes are traditionally cumbersome, requiring intricate setups and manual adjustments. If you’ve faced these difficulties, then you’ll want…

Understanding and Using Segment Attributes in SAMSON

Molecular modelers often need to work with segments of complex molecular systems. These segments can represent chains, groups, or specific structural units within the model. To effectively manage, filter, and manipulate these segments, SAMSON’s Node Specification Language (NSL) provides a…

Unveiling Aromatic Atoms: Simplified Selection in SAMSON’s NSL.

Working with aromatic atoms is a common task in molecular modeling, whether you’re analyzing chemical properties, studying interactions, or designing molecules. However, identifying these aromatic atoms in complex molecular structures can sometimes become cumbersome and time-consuming. Fortunately, SAMSON’s Node Specification…

Fixing Small Icons on High DPI Monitors with SAMSON

Modern High DPI monitors are a game-changer for molecular modeling. Crisp visuals and detailed displays can truly elevate your design experience, but they also come with occasional quirks. Many SAMSON users working on High DPI monitors have encountered a common…

Understanding and Utilizing Property Model Attributes in SAMSON

As a molecular modeler, you often deal with complex datasets, molecular property visualizations, and custom attributes that characterize different molecular entities. Efficiently managing these attributes is crucial for accuracy and speed. SAMSON’s Node Specification Language (NSL) offers an organized approach…

Streamlining File Management with File Attributes in SAMSON

When working on complex molecular modeling projects, keeping track of files, their states, and their selections can become a daunting task. Fortunately, SAMSON’s Node Specification Language (NSL) provides tools for efficiently managing and querying file attributes. In this blog post,…